1. Kwak MJ*, Kong HG*, Choi K*, Kwon SK*, Song JY*, Lee J, Lee PY, Choi SY, Seo M, Lee HJ, Jung EJ, Park H, Roy N, Kim H, Lee MM, Rubin EM, Lee SW, Kim JF. Wilt-resistant tomato modulates rhizosphere microbiota to prevent infection. Nature Biotechnology Published online on Oct. 8, 2018. *Equal contribution
2. Kwak MJ, Lee J, Kwon SK, Kim JF. Genome information of Maribacter dokdonensis DSW-8 and comparative analysis with other Maribacter genomes. Journal of Microbiology and Biotechnology 27(3):591-597, 2017.
3. Yoon K, Song JY, Kwak MJ, Kwon SK, Kim JF. Genome characteristics of the proteorhodopsin-containing marine flavobacterium Polaribacter dokdonensis DSW-5. Journal of Microbiology 55(7):561-567, 2017.
4. Kwak MJ*, Kwon SK*, Kim JF. Complete genome sequence of the sand-sediment actinobacterium Nocardioides dokdonensis FR1436T. Standards in Genomic Sciences 12:44, 2017. *Equal contribution
5. Kwak MJ, Kwon SK, Yoon JK, Song JY, Seo JG, Chung MJ, Kim JF. Evolutionary architecture of the infant-adapted group of Bifidobacterium species associated with the probiotic function. Systematic and Applied Microbiology 39(7):429-439, 2016.
6. Kim K,* Kwon SK,* Jun SH,* Cha JS, Kim H, Lee W, Kim JF,† Cho HS†. Crystal structure and functional characterization of a light-driven chloride pump having an NTQ motif. Nature Communications 7:12677, 2016. *Equal contribution [Recommended by F1000 Prime]
7. Kim K,* Kwon SK,* Yoon JH, Kim JF. Complete genome sequence of the proteorhodopsin-containing marine flavobacterium Dokdonia donghaensis DSW-1T, isolated from seawater off Dokdo in the East Sea (Sea of Korea). Genome Announcements 4(4):e00804-16, 2016. *Equal contribution
8. Kwak MJ, Kim MS, Kwon SK, Cho SH, Kim JF. Genome sequence of Escherichia coli NCCP15653, a group D strain isolated from a diarrhea patient. Gut Pathogens 8:7, 2016.
9. Cha JY, Han S, Hong HJ, Cho H, Kim D, Kwon Y, Kwon SK, Crusemann M, Bok Lee Y, Kim JF, Giaever G, Nislow C, Moore BS, Thomashow LS, Weller DM, Kwak YS. Microbial and biochemical basis of a Fusarium wilt-suppressive soil. ISME Journal 10(1):119-129, 2015.
10. Kwak MJ, Kwon SK, Yoon JH, Kim JF. Genome sequence of Lysobacter dokdonensis DS-58T, a gliding bacterium isolated from soil in Dokdo, Korea. Standards in Genomic Sciences 10:123, 2015.
11. Kwon SK,* Kim SK,* Lee DH, and Kim JF. Comparative genomics and experimental evolution of Escherichia coli BL21(DE3) strains reveal the landscape of toxicity escape from membrane protein overproduction. Scientific Reports 5:16076, 2015. *Equal contribution
12. Kwon SK, Lee HG, Kwak MJ, Kim JF. Genome sequence of the marine flavobacterium Croceitalea dokdonensis DOKDO 023 that contains proton- and sodium-pumping rhodopsins. Marine Genomics 26:1-3, 2016.
13. Kwon SK, Kwak MJ, Seo JG, Chung MJ, Kim JF. Complete genome sequence of Bifidobacterium longum KCTC 12200BP, a probiotic strain promoting the intestinal health. Journal of Biotechnology 214:169-170, 2015.
14. Kwak MJ, Yoon JK, Kwon SK, Chung MJ, Seo JG, Kim JF. Complete genome sequence of the probiotic bacterium Bifidobacterium breve KCTC 12201BP isolated from a healthy infant. Journal of Biotechnology 214:156-157, 2015.
15. Na YA, Lee JY, Bang WJ, Lee HJ, Choi SI, Kwon SK, Jung KJ, Kim JF, and Kim P. Growth retardation of Escherichia coli by artificial increase of intracellular ATP. Journal of Industrial Microbiology & Biotechnology 42(6):915-924, 2015.
16. Kwak MJ, Kwon SK Cho SH, and Kim JF. Genome sequences of the Shiga-like toxin-producing Escherichia coli NCCP15655 and NCCP15656. Gut Pathogens 7:13, 2015.
17. Kwon SK, Kim BK, Song JY, Kwak MJ, Lee CH, Yoon JH, Oh TK, and Kim JF. Genomic makeup of the marineflavobacterium Nonlabens (Donghaeana) dokdonensis and widespread occurrence of a novel class of rhodopsins. Genome Biology and Evolution 5(1):187-199, 2013. [Cover story paper]
18. Song JY, Kim BK, Kwon SK, Kwak MJ, and Kim JF. Next-generation sequencing for environmental biology -- full-fledged environmental genomics around the corner. Korean Journal of Environmental Biology. 30:77-89, 2012.
19. Jeong H, Zhao F, Igori D, Oh KH, Kim SY, Kang SG, Kim BK, Kwon SK Lee CH, Song JY, Yu DS, Park MS, Cho SH, and Kim JF. Genome sequence of the hemolytic uremic syndrome-causing strain Escherichia coli NCCP15647. Journal of Bacteriology 194:3747-3748, 2012.
20. Kim BK, Chung Jh, Kim SY, Jeong H, Kang SG, Kwon SK, Lee CH, Song JY, Yu DS, Ryu CM, and Kim JF. Genome sequence of the leaf-colonizing bacterium, Bacillus sp. strain 5B6, isolated from a cherry tree. Journal of Bacteriology 194:3758-3759, 2012.
21. Kim BK, Lee SH, Kim SY, Jeong H, Kwon SK Lee CH, Song JY, Yu DS, Kang SG, and Kim JF. Genome sequence of an oligohaline hyperthermophilic archaeon, Thermococcus zilligii AN1, isolated from a terrestrial geothermal freshwater spring. Journal of Bacteriology 194:3765-3766, 2012.
22. Kim BK, Song GC, Hong GH, Seong WK, Kim SY, Jeong H, Kang SG, Kwon SK, Lee CH, Song JY, Yu DS, Park MS, Cho SH, and Kim JF. Genome sequence ofthe Shiga toxin-producing Escherichia coli strain NCCP15657. Journal of Bacteriology 194:3751-3752, 2012.
23. Kwak MJ, Song JY, Kim SY, Jeong H, Kang SG, Kim BK, Kwon SK, Lee CH, Yu DS, Park SH, and Kim JF. Complete genome sequence of the endophytic bacterium Burkholderia sp. KJ006. Journal of Bacteriology 194:4432-4433, 2012.
24. Song JY, Kim HA, Kim JS, Kim SY, Jeong H, Kang SG, Kim BK, Kwon SK, Lee CH, Yu DS, Kim BS, Kim SH, Kwon SY, and Kim JF. Genome sequence of theplant growth-promoting rhizobacterium Bacillus sp. strain JS. Journal of Bacteriology 194:3760-3761, 2012.
25. Song JY, Yoo RH, Jang SY, Seong WK, Kim SY, Jeong H, Kang SG, Kim BK, Kwon SK, Lee CH, Yu DS, Park MS, Cho SH, and Kim JF. Genome sequence of enterohemorrhagic Escherichia coli NCCP15658. Journal of Bacteriology 194:3749-3750, 2012.
26. Yu DS, Jeong H,* Lee D,* Kwon SK,* Song JY, Kim BK, Park MS, Jie GE, Oh TK, and Kim JF. Complete genome sequence of the probiotic bacterium Bifidobacterium bifidum strain BGN4. Journal of Bacteriology 194:4757-4758, 2012. *Equal contribution
27. Kwon SK, Park YK, and Kim JF. Genome-wide screening and identificationof factors affecting prodigiosin biosynthesis of Hahella chejuensis, using the surrogate host Escherichia coli. Applied and Environmental Microbiology 76:1661-1668, 2010. [Cover story paper]
28. Kim D, Kim JF, Yim JH, Kwon SK Lee CH, and Lee HK. Red to red – the marine bacterium Hahella chejuensis and its product prodigiosin for mitigation of harmful algal blooms. Journal of Microbiology and Biotechnology 18:1621-1629, 2008.
연구성과 - 특허
1. 김지현, 김기태, 권순경. "대장균의 생장속도 증진을 위한 비브리오 나트리에겐스로부터 유래한 rrnA 프로모터를 포함하는 발현카세트 및 상기 발현카세트가 도입된 재조합 대장균" 대한민국 특허 등록일자: 2017.04.19, 등록번호: 10-1753327.
2. 김지현, 양희진, 권순경, 김선창. "생장속도가 증진된 대장균 변이주 및 이의 제조방법" 대한민국 특허 등록일자: 2017.09.25, 등록번호: 10-1783414.
